board: sama5d3xek: Update to support DM/DT

Update the configuration files to support the device tree and
driver model, so do SPL. The device clock and pins configuration
are handled by the clock and the pinctrl drivers respectively.

Signed-off-by: Wenyou Yang <wenyou.yang@atmel.com>
Add back CONFIG_PHY_MICREL to prevent a build error:
Signed-off-by: Simon Glass <sjg@chromium.org>
diff --git a/configs/sama5d3xek_nandflash_defconfig b/configs/sama5d3xek_nandflash_defconfig
index 7f68d7d..2cd6691 100644
--- a/configs/sama5d3xek_nandflash_defconfig
+++ b/configs/sama5d3xek_nandflash_defconfig
@@ -4,8 +4,11 @@
 CONFIG_SPL_GPIO_SUPPORT=y
 CONFIG_SPL_LIBCOMMON_SUPPORT=y
 CONFIG_SPL_LIBGENERIC_SUPPORT=y
+CONFIG_SYS_MALLOC_F_LEN=0x2000
 CONFIG_SPL_SERIAL_SUPPORT=y
+CONFIG_SPL_DRIVERS_MISC_SUPPORT=y
 CONFIG_SPL_NAND_SUPPORT=y
+CONFIG_DEFAULT_DEVICE_TREE="sama5d36ek"
 CONFIG_FIT=y
 CONFIG_SYS_EXTRA_OPTIONS="SAMA5D3,SYS_USE_NANDFLASH"
 CONFIG_BOOTDELAY=3
@@ -25,12 +28,38 @@
 CONFIG_CMD_MII=y
 CONFIG_CMD_PING=y
 CONFIG_CMD_FAT=y
+CONFIG_OF_CONTROL=y
+CONFIG_SPL_OF_CONTROL=y
+CONFIG_OF_SPL_REMOVE_PROPS="interrupts interrupt-parent dmas dma-names"
+CONFIG_DM=y
+CONFIG_SPL_DM=y
+CONFIG_SPL_DM_SEQ_ALIAS=y
+CONFIG_CLK=y
+CONFIG_SPL_CLK=y
+CONFIG_CLK_AT91=y
+CONFIG_AT91_UTMI=y
+CONFIG_AT91_H32MX=y
+CONFIG_DM_GPIO=y
+CONFIG_AT91_GPIO=y
+CONFIG_DM_MMC=y
+CONFIG_GENERIC_ATMEL_MCI=y
 CONFIG_MTD_NOR_FLASH=y
+CONFIG_DM_SPI_FLASH=y
 CONFIG_SPI_FLASH=y
 CONFIG_SPI_FLASH_ATMEL=y
+CONFIG_DM_ETH=y
+CONFIG_MACB=y
+CONFIG_PINCTRL=y
+CONFIG_SPL_PINCTRL=y
+CONFIG_PINCTRL_AT91=y
+CONFIG_DM_SERIAL=y
+CONFIG_ATMEL_USART=y
+CONFIG_DM_SPI=y
+CONFIG_ATMEL_SPI=y
 CONFIG_USB=y
+CONFIG_DM_USB=y
+CONFIG_USB_EHCI_HCD=y
 CONFIG_USB_STORAGE=y
 CONFIG_USB_GADGET=y
 CONFIG_USB_GADGET_ATMEL_USBA=y
 CONFIG_LCD=y
-CONFIG_OF_LIBFDT=y